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Bumps the python group with 7 updates in the / directory:

Package From To
matplotlib 3.10.9 3.11.1
notebook 7.5.6 7.6.1
pandas 3.0.3 3.0.5
ruff 0.15.14 0.16.0
mypy 2.1.0 2.3.0
pre-commit 4.6.0 4.6.1
pytest 9.0.3 9.1.1

Updates matplotlib from 3.10.9 to 3.11.1

Release notes

Sourced from matplotlib's releases.

REL: v3.11.1

This is the first bugfix release of the 3.11.x series.

This release contains several bug-fixes and adjustments:

  • Fix tight layout of multiple subplots with sharey=True
  • Fix NoNorm cursor formatting for uint8 images
  • Fix occasional misalignment in reported mouse position (also fix a bug with canvas height)
  • Fix clipped Axis labels on 3D plots with tight layout
  • Fix inverted Axis on 3D plots
  • Fix restoring 'auto' aspect in 3D axes after switching from 'equal'
  • Fix missing glyphs when subsetting Type 1 fonts in PDF
  • Fix oversized embedding of Type 42 fonts in PDF/PostScript files

As well as several documentation and typing improvements and corrections.

REL: v3.11.0

The largest change within this release is a complete overhaul of text and font processing. Through the use of libraqm, HarfBuzz, SheenBidi, and an updated release of FreeType, all text should now support modern font features, enabling full internationalization in all languages. Not all features of these libraries are supported yet, but we expect this work to enable further improvements in an easier manner.

Outside of text handling, there are several improvements to 3D Axes, performance, new accessible colour sequences, flexible figure management, and more. See the release notes for more information.

REL: v3.11.0rc2

This is the second release candidate for the meso release 3.11.0.

This release candidate fixes some problems with downstream packages, removes some missed deprecations, and corrects some additional minor bugs.

REL: v3.11.0rc1

After an extended development stretch, we are pleased to announce the first release candidate of Matplotlib 3.11.0.

The largest change within this release is a complete overhaul of text and font processing. Through the use of libraqm, HarfBuzz, SheenBidi, and an updated release of FreeType, all text should now support modern font features, enabling full internationalization in all languages. Not all features of these libraries are supported yet, but we expect this work to enable further improvements in an easier manner. Due to the update to the font rendering stack, we cannot guarantee that text will be bit-for-bit perfect with previous releases, so if you are using Matplotlib for testing, it may be necessary to introduce/raise a tolerance within your tests.

Outside of text handling, there are several improvements to 3D Axes, performance, new accessible colour sequences, flexible figure management, and more. Final release notes are still being curated, but you may browse the list of new features, API changes, and all issues/pull requests on the milestone.

As a note for downstream packagers, the font libraries have only been tested against the versions bundled with the wheels. It may be possible to expand the range of requirements, or that a requirement is too broad. Please report any issues you have building against external dependencies.

Commits
  • 3c1757a REL: v3.11.1
  • 792c6b5 DOC: Prepare for 3.11.1
  • aaff9f6 Merge branch 'v3.11.0-doc' into v3.11.x
  • d4f4527 Merge pull request #32052 from meeseeksmachine/auto-backport-of-pr-32038-on-v...
  • 6ad4bcf Merge pull request #32050 from meeseeksmachine/auto-backport-of-pr-31304-on-v...
  • 7fb74d3 Merge pull request #32051 from meeseeksmachine/auto-backport-of-pr-32037-on-v...
  • c624aec Backport PR #32038: Fix occasional misalignment in reported mouse position (a...
  • 8eda2b7 Backport PR #32037: Bump the actions group with 3 updates
  • a0e7ae5 Backport PR #31304: Fix restoring 'auto' aspect in 3D axes after switching fr...
  • 9001323 Merge pull request #32047 from meeseeksmachine/auto-backport-of-pr-32025-on-v...
  • Additional commits viewable in compare view

Updates notebook from 7.5.6 to 7.6.1

Release notes

Sourced from notebook's releases.

v7.6.1

7.6.1

(Full Changelog)

Maintenance and upkeep improvements

Contributors to this release

The following people contributed discussions, new ideas, code and documentation contributions, and review. See our definition of contributors.

(GitHub contributors page for this release)

@​jtpio (activity)

v7.6.0

7.6.0

(Full Changelog)

Enhancements made

Bugs fixed

Maintenance and upkeep improvements

... (truncated)

Changelog

Sourced from notebook's changelog.

7.6.1

(Full Changelog)

Maintenance and upkeep improvements

Contributors to this release

The following people contributed discussions, new ideas, code and documentation contributions, and review. See our definition of contributors.

(GitHub contributors page for this release)

@​jtpio (activity)

7.6.0

(Full Changelog)

Enhancements made

Bugs fixed

Maintenance and upkeep improvements

... (truncated)

Commits

Updates pandas from 3.0.3 to 3.0.5

Release notes

Sourced from pandas's releases.

pandas 3.0.5

We are pleased to announce the release of pandas 3.0.5. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

pandas 3.0.4

We are pleased to announce the release of pandas 3.0.4. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits
  • e68db09 RLS: 3.0.5
  • 0697623 Backport PR #66428: DOC: update whatsnew for 3.0.5 (#66430)
  • 5d846d0 Backport PR #66090 on branch 3.0.x (BLD: exclude numpy 2.5.0 when building wh...
  • bef7a2b Backport PR #66169 on branch 3.0.x (CI: Fix pyarrow-nightly job (stale nightl...
  • 8188eb1 RLS: 3.0.4 (#66079)
  • bd35f15 [3.0.x] BUG: fix CoW issue in eval() (#66072)
  • 6195872 [backport 3.0.x] BUG: anchor whole alternation in Series.str.match for PyArro...
  • 70313be Backport PR #66051 on branch 3.0.x (BUG: fix regression in DataFrame setitem ...
  • 57ed3e2 [backport 3.0.x] Bump pypa/cibuildwheel from 3.4.1 to 4.1.0 (#65934) (#66026)
  • f9693fc [backport 3.0.x] BUG(pandas 3.0 regression): drop(index=...) doesn't accept N...
  • Additional commits viewable in compare view

Updates ruff from 0.15.14 to 0.16.0

Release notes

Sourced from ruff's releases.

0.16.0

Release Notes

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

  • Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules.

  • Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

  • Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

    import math  # ruff: ignore[F401]
ruff: ignore[F401]
import os

  • Fixes are now shown in check and format --check output:

    ❯ ruff format --check .
unformatted: File would be reformatted
 --> try.md:1:1
  |
1 | ```python
  - import   math
2 + import math
3 | ```
  |
1 file would be reformatted

    This example also shows off the Markdown formatting.

  • format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

    ❯ ruff format --check --output-format github .
::error title=ruff (unformatted),file=try.md,line=2,col=8,endLine=2,endColumn=10::try.md:2:8: unformatted: File would be reformatted

    See the CLI help or documentation for the full list of supported formats.

  • The filename, location, end_location, fix.edits[].location, and fix.edits[].end_location fields in the JSON output format may now be null rather than defaulting to the empty string and row 1, column 1, respectively.

... (truncated)

Changelog

Sourced from ruff's changelog.

0.16.0

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

  • Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules.

  • Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

  • Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

    import math  # ruff: ignore[F401]
ruff: ignore[F401]
import os

  • Fixes are now shown in check and format --check output:

    ❯ ruff format --check .
unformatted: File would be reformatted
 --> try.md:1:1
  |
1 | ```python
  - import   math
2 + import math
3 | ```
  |
1 file would be reformatted

    This example also shows off the Markdown formatting.

  • format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

    ❯ ruff format --check --output-format github .
::error title=ruff (unformatted),file=try.md,line=2,col=8,endLine=2,endColumn=10::try.md:2:8: unformatted: File would be reformatted

... (truncated)

Commits
  • a2635fd Bump 0.16.0 (#27136)
  • 3433449 [ty] Reuse full call diagnostics for implicit setter calls (#27115)
  • 2240070 Reflect ruff: ignore and --add-ignore stabilization in documentation (#27...
  • 17ef711 Stabilize --add-ignore (#27125)
  • ef912bb Add newly stabilized rules to defaults (#27055)
  • b30f040 Stabilize new default rules (#27035)
  • bcd70c5 Exclude Markdown files from format-dev runs (#27052)
  • 87e51e2 Fix format --check spans for syntax errors (#27045)
  • afe2723 [flake8-gettext] Stabilize qualified-name and built-in binding resolution (...
  • a9702d8 [flake8-bandit] Stabilize string literal binding resolution (S310) (#26944)
  • Additional commits viewable in compare view

Updates mypy from 2.1.0 to 2.3.0

Changelog

Sourced from mypy's changelog.

Mypy Release Notes

Next Release

Packaging changes

Mypy 2.3

We've just uploaded mypy 2.3.0 to the Python Package Index (PyPI). Mypy is a static type checker for Python. This release includes new features, performance improvements and bug fixes. You can install it as follows:

python3 -m pip install -U mypy

You can read the full documentation for this release on Read the Docs.

The Upcoming Switch to the New Native Parser

We are planning to enable the new native parser (--native-parser) by default soon. We recommend that you test the native parser in your projects and report any issues in the mypy issue tracker.

Mypyc Free-threading Memory Safety

Free-threaded Python builds that don't have the GIL require additional synchronization primitives or lock-free algorithms to ensure memory safety when there are race conditions (for example, when a thread reads a list item while another thread writes the same list item concurrently). This release greatly improves memory safety of free threading.

List operations are now memory-safe on free threaded Python builds, even in the presence of race conditions. This has some performance cost. For list-heavy workloads, using librt.vecs.vec instead of list is often significantly faster, but note that vec is not (and likely won't be) fully memory safe, and the user is expected to avoid race conditions. The newly introduced librt.threading.Lock helps with this. Using variable-length tuples can also be more efficient than lists, since tuples are immutable and don't require expensive synchronization to ensure memory safety.

Instance attribute access is also (mostly) memory safe now on free-threaded builds in the presence of race conditions. We are planning to fix the remaining unsafe cases in a future release.

Full list of changes:

  • Make attribute access memory safe on free-threaded builds (Jukka Lehtosalo, PR 21705)
  • Fix unsafe borrowing of instance attributes with free-threading (Jukka Lehtosalo, PR 21688)
  • Make list get/set item more memory safe on free-threaded builds (Jukka Lehtosalo, PR 21683)
  • Don't borrow list items on free-threaded builds (Jukka Lehtosalo, PR 21679)
  • Make multiple assignment from list memory-safe on free-threaded builds (Jukka Lehtosalo, PR 21684)

... (truncated)

Commits
  • 8aabf84 Drop +dev from version
  • 4d8ad2a Update changelog for 2.3 release (#21728)
  • 2c21546 [mypyc] Update documentation of race conditions under free threading (#21726)
  • a9f62a3 [mypyc] Make attribute access memory safe on free-threaded builds (#21705)
  • 0faa413 Use PYODIDE environment variable for Emscripten cross-compilation detection...
  • 3d75cdb [mypyc] Borrow final attributes more aggressively (#21702)
  • 24c237d [mypyc] Improve documentation of Final (#21713)
  • b5be217 [mypyc] Update free threading Python compatibility docs (#21711)
  • cbcb51a Narrow for frozendict membership check (#21709)
  • af2bc0f Sync typeshed (#21707)
  • Additional commits viewable in compare view

Updates pre-commit from 4.6.0 to 4.6.1

Release notes

Sourced from pre-commit's releases.

pre-commit v4.6.1

Fixes

Changelog

Sourced from pre-commit's changelog.

4.6.1 - 2026-07-21

Fixes

Commits
  • 242ce8a v4.6.1
  • 766e550 Merge pull request #3727 from pre-commit/dedupe
  • 1558d06 Merge pull request #3726 from pre-commit/exists-faster
  • 8a1c47a avoid duplicate files in --all-files during conflict
  • 2e01c99 faster check of rev existing locally as a commit
  • 3613bf2 Merge pull request #3701 from pre-commit/autoupdate-repos
  • 1d811d9 Return an error for invalid --repo
  • 374d354 Merge pull request #3711 from damonbayer/dmb_JULIA_DEPOT_PATH
  • 1e7994f set JULIA_DEPOT_PATH
  • b2b9119 Merge pull request #3719 from pre-commit/npm-unknown-options
  • Additional commits viewable in compare view

Updates pytest from 9.0.3 to 9.1.1

Release notes

Sourced from pytest's releases.

9.1.1

pytest 9.1.1 (2026-06-19)

Bug fixes

  • #14220: Fixed a logic bug in pytest.RaisesGroup which would might cause it to display incorrect "It matches FooError() which was paired with BarError" messages.
  • #14591: Fixed a regression in pytest 9.1.0 which caused overriding a parametrized fixture with an indirect @​pytest.mark.parametrize to fail with "duplicate parametrization of '<fixture name>'".
  • #14606: Fixed list-item typing errors from mypy in @pytest.mark.parametrize <pytest.mark.parametrize ref> argvalues parameter.
  • #14608: Fixed a regression in pytest 9.1.0 where conftest.py files located in <invocation dir>/test* were no longer loaded as initial conftests when invoked without arguments. This could cause certain hooks (like pytest_addoption) in these files to not fire.

9.1.0

pytest 9.1.0 (2026-06-13)

Removals and backward incompatible breaking changes

  • #14533: When using --doctest-modules, autouse fixtures with module, package or session scope that are defined inline in Python test modules (not plugins or conftests) will now possibly execute twice.

    If this is undesirable, move the fixture definition to a conftest.py file if possible.

    Technical explanation for those interested: When using --doctest-modules, pytest possibly collects Python modules twice, once as pytest.Module and once as a DoctestModule (depending on the configuration). Due to improvements in pytest's fixture implementation, if e.g. the DoctestModule collects a fixture, it is now visible to it only, and not to the Module. This means that both need to register the fixtures independently.

Deprecations (removal in next major release)

  • #10819: Added a deprecation warning for class-scoped fixtures defined as instance methods (without @classmethod). Such fixtures set attributes on a different instance than the test methods use, leading to unexpected behavior. Use @classmethod decorator instead -- by yastcher.

    See 10819 and 14011.

  • #12882: Calling request.getfixturevalue() <pytest.FixtureRequest.getfixturevalue> during teardown to request a fixture that was not already requested is now deprecated and will become an error in pytest 10.

    See dynamic-fixture-request-during-teardown for details.

  • #13409: Using non-~collections.abc.Collection iterables (such as generators, iterators, or custom iterable objects) for the argvalues parameter in @pytest.mark.parametrize <pytest.mark.parametrize ref> and metafunc.parametrize <pytest.Metafunc.parametrize> is now deprecated.

    These iterables get exhausted after the first iteration, leading to tests getting unexpectedly skipped in cases such as running pytest.main() multiple times, using class-level parametrize decorators, or collecting tests multiple times.

    See parametrize-iterators for details and suggestions.

  • #13946: The private config.inicfg attribute is now deprecated. Use config.getini() <pytest.Config.getini> to access configuration values instead.

    See config-inicfg for more details.

  • #14004: Passing baseid to ~pytest.FixtureDef or nodeid strings to fixture registration APIs is now deprecated. These are internal pytest APIs that are used by some plugins.

... (truncated)

Commits
  • cf470ec Prepare release version 9.1.1
  • e0c8ce6 Merge pull request #14625 from pytest-dev/patchback/backports/9.1.x/a07c31a97...
  • 1b82d16 Merge pull request #14624 from pytest-dev/patchback/backports/9.1.x/b375b79ec...
  • 501c4bc Merge pull request #14596 from bluetech/doc-classmethod
  • b61f588 Merge pull request #14622 from chrisburr/fix-14608-initial-conftest-test-subdir
  • 9a567e0 [automated] Update plugin list (#14617) (#14618)
  • ef8b299 Merge pull request #14620 from pytest-dev/patchback/backports/9.1.x/680f9f3ed...
  • 66abd07 Merge pull request #14220 from bysiber/fix-stale-iexp-raisesgroup
  • 79fbf93 Merge pull request #14612 from pytest-dev/patchback/backports/9.1.x/974ed48b6...
  • 0d312eb Merge pull request #14611 from bluetech/parametrize-argvalues-typing
  • Additional commits viewable in compare view

Updates setuptools from 80.10.1 to

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@dependabot
Bump the python group across 1 directory with 8 updates
a7abf40 
Bumps the python group with 7 updates in the / directory:

| Package | From | To |
| --- | --- | --- |
| [matplotlib](https://github.com/matplotlib/matplotlib) | `3.10.9` | `3.11.1` |
| [notebook](https://github.com/jupyter/notebook) | `7.5.6` | `7.6.1` |
| [pandas](https://github.com/pandas-dev/pandas) | `3.0.3` | `3.0.5` |
| [ruff](https://github.com/astral-sh/ruff) | `0.15.14` | `0.16.0` |
| [mypy](https://github.com/python/mypy) | `2.1.0` | `2.3.0` |
| [pre-commit](https://github.com/pre-commit/pre-commit) | `4.6.0` | `4.6.1` |
| [pytest](https://github.com/pytest-dev/pytest) | `9.0.3` | `9.1.1` |



Updates `matplotlib` from 3.10.9 to 3.11.1
- [Release notes](https://github.com/matplotlib/matplotlib/releases)
- [Commits](matplotlib/matplotlib@v3.10.9...v3.11.1)

Updates `notebook` from 7.5.6 to 7.6.1
- [Release notes](https://github.com/jupyter/notebook/releases)
- [Changelog](https://github.com/jupyter/notebook/blob/@jupyter-notebook/tree@7.6.1/CHANGELOG.md)
- [Commits](https://github.com/jupyter/notebook/compare/@jupyter-notebook/tree@7.5.6...@jupyter-notebook/tree@7.6.1)

Updates `pandas` from 3.0.3 to 3.0.5
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v3.0.3...v3.0.5)

Updates `ruff` from 0.15.14 to 0.16.0
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.15.14...0.16.0)

Updates `mypy` from 2.1.0 to 2.3.0
- [Changelog](https://github.com/python/mypy/blob/master/CHANGELOG.md)
- [Commits](python/mypy@v2.1.0...v2.3.0)

Updates `pre-commit` from 4.6.0 to 4.6.1
- [Release notes](https://github.com/pre-commit/pre-commit/releases)
- [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md)
- [Commits](pre-commit/pre-commit@v4.6.0...v4.6.1)

Updates `pytest` from 9.0.3 to 9.1.1
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@9.0.3...9.1.1)

Updates `setuptools` from 80.10.1 to 
- [Release notes](https://github.com/pypa/setuptools/releases)
- [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst)
- [Commits](https://github.com/pypa/setuptools/commits)

---
updated-dependencies:
- dependency-name: matplotlib
  dependency-version: 3.11.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: notebook
  dependency-version: 7.6.1
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: pandas
  dependency-version: 3.0.5
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python
- dependency-name: ruff
  dependency-version: 0.16.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: mypy
  dependency-version: 2.3.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: pre-commit
  dependency-version: 4.6.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python
- dependency-name: pytest
  dependency-version: 9.1.1
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: setuptools
  dependency-version:
  dependency-type: direct:development
  dependency-group: python
...

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 95.23%. Comparing base (a8f19c3) to head (a7abf40).

Additional details and impacted files 
@@           Coverage Diff           @@
##             main      #87   +/-   ##
=======================================
  Coverage   95.23%   95.23%           
=======================================
  Files           3        3           
  Lines          42       42           
  Branches        4        4           
=======================================
  Hits           40       40           
  Misses          1        1           
  Partials        1        1

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