Fix Rikyu and DGX Spark scheduler configuration - #74
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Signed-off-by: William Dawson <william.dawson@riken.jp>
Signed-off-by: William Dawson <william.dawson@riken.jp>
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Build: nvhpc/26.3 + OpenACC + cc100 (B200/Blackwell), with FORTRAN_COMPILER_HAS_MPI_VERSION3=OFF to work around the MPI_Iallreduce hang at >1 rank. Run: per-rank GPU binding via wrapper.sh (CUDA_VISIBLE_DEVICES), UCX_IB_GPU_DIRECT_RDMA=no for 2+ nodes, and runtime patching of the ¶llel section to nproc_ob=N (orbital-only decomposition, no real-space grid split) which is the verified GPU-optimal layout. Depends on RIKEN-RCCS#74 for RIKYU system/queue config (gpu partition, account=rkp00012). Signed-off-by: William Dawson <william.dawson@riken.jp> 💘 Generated with Crush Assisted-by: glm-5.2 via Crush <crush@charm.land>
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Problem
BenchKit's shared scheduler configuration no longer matched the live Rikyu
and R-CCS Cloud DGX Spark queues:
1n1gpupartition and did not pass a project account.ng-dgx-3hpartition.Changes
accountfield toconfig/system.csvand expose it toscheduler templates.
gpuand accountrkp00012.ng-dgx-m1.test_submit.sh.--gpus=N, rather thanthe unsupported per-node form.
Systems that do not require an explicit account leave the field empty and
retain their current behavior.
Validation
bash -n scripts/job_functions.sh scripts/matrix_generate.sh scripts/test_submit.shpython3 result_server/tests/check_site_config.pygit diff --check-p gpu --account=rkp00012-p ng-dgx-m1scripts/test_submit.sh sbd 2from the dependent PR checkout to submita real two-node/eight-GPU Rikyu job. Slurm accepted
--gpus=8, the job completed successfully, and SBD converged to-76.2437767768609 Ha.The SBD application PR depends on this shared site fix.