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Kludge defuzz fuzzy features - #201

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jakebeal merged 1 commit into
feature/sbol3-genbank-conversionfrom
200-kludge-defuzz-fuzzy-features
Mar 27, 2023
Merged

Kludge defuzz fuzzy features#201
jakebeal merged 1 commit into
feature/sbol3-genbank-conversionfrom
200-kludge-defuzz-fuzzy-features

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This patch provides a workaround for #200.

The problem is that fuzzy locations were creating invalid SBOL documents by

  1. adding a non-standard sbol#locationPosition type, and
  2. references to an unrecognized Location from a SequenceFeature.

This patch temporarily addresses this issue by reverting to the prior behavior of truncating fuzzy ranges into ranges.

…s be 1) add a non-standard sbol#locationPosition type, and 2) reference to an unrecognized Location from a SequenceFeature.

Temporarily address this by reverting to the prior behavior of truncating fuzzy ranges into ranges.
@jakebeal
jakebeal requested a review from tcmitchell March 26, 2023 21:38
@jakebeal
jakebeal merged commit 1840948 into feature/sbol3-genbank-conversion Mar 27, 2023
@jakebeal
jakebeal deleted the 200-kludge-defuzz-fuzzy-features branch March 27, 2023 16:14
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2 participants