Antigenic Cartography
The Centre for Pathogen Evolution, Department of Zoology, University of Cambridge, UK
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ncbi-taxonomy-database
ncbi-taxonomy-database PublicHow to make a mysql or sqlite database of NCBI taxonomy data for use with the dark-matter lineage fetcher
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- bermejo_netzl_et_al2025 Public
This repository contains the code and data for the manuscript by Bermejo, M., Netzl, A., et al. 2025
- NIAID_CEIRR_antigenic_cartography_workshop2025 Public
This repository contains all code for the NIAID CEIRR Training Program Antigenic Cartography Workshop July 9-10, 2025
- midtools Public
Multiple Infection Detection - Python for detecting multiple infections from sequence reads and trying to pick them apart
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