IGVF Bridge Project

This repository contains analysis notebooks for the Bridge project, focused on snRNA-seq dataset annotation, comparison, and differential expression analysis.

Repository structure

.
└── snRNA
    ├── bridge_10x_snRNA_annotation.ipynb
    ├── bridge_Broad_SHARE_snRNA_annotation.ipynb
    ├── bridge_UCI_SHARE_snRNA_annotation.ipynb
    ├── broad_bridge_snRNA_annotation.ipynb
    ├── deg_analysis.ipynb
    └── general_dataset_comparison_clean.ipynb