Project Manager for NGS data analysis
Pipeline for Analysis of ChIP-Seq data
cisVar scripts.
A command-line toolkit for summarizing, analyzing, and interpreting ChIP-Seq and RNA-Seq experiments, designed for enhancer and super-enhancer region analysis in tumor-normal pairs, with applications in differential enrichment and multi-sample domain analysis.
A snakemake based workflow for ChIPSeq data analysis
Which ESR1 and PGR binding sites are functional?
Genomic annotation of ChIP-seq/ATAC-seq peaks, showing where in the genome your signal actually lands.
Snakemake ChIP-seq analysis pipeline with MACS2 peak calling and motif analysis
Distribution of ChIP-seq peak widths, distinguishing sharp transcription-factor from broad histone marks.
Snakemake Pipeline for the Analyses of ChIP-seq data in Cancer samples
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