A universal toolkit for upstream processing of long RNA reads
Single cell Nanopore sequencing data for Genotype and Phenotype
A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.
Python Client Library for the G2P Portal API
A GTF-native ORF annotation tool for transcriptomes
A Snakemake pipeline developed to quantify isoforms expression levels in large RNA-seq datasets and find poly-A sites
Evidence-based refinement of Helixer deep-learning gene annotations. The prediction is the backbone; RNA-seq and protein evidence refine it only where they outscore it.
A webtool for visualizing alternative RNA isoforms across integrated long-read RNA-seq and pseudobulked single-cell short-read RNA-seq data.
A python module to read and plot Galaxy RNA-seq data
A Snakemake pipeline developed to quantify isoforms expression levels in large RNA-seq datasets and find poly-A sites
Get the latest gene-transcript identifiers using Ensembl, RefSeq, MANE and LRGs models.
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