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kmp-algorithm

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A package-like tool that analyzes protein sequences, categorizes a protein of interest into one of two groups, predicts secondary structure based on dihedral angles/Ramachandran plots and Chou and Fasman's statistical propensity method, and does pattern search by Naive, KMP, and Bayer-Moore

  • Updated Nov 27, 2023
  • Python

A high-performance text plagiarism detection pipeline engineering exact string matching via Knuth-Morris-Pratt (KMP) and Rabin-Karp architectures, coupled with structural winnowing fingerprinting for local alignment. Implements an optimized sub-linear time candidate screening matrix leveraging MinHash and Locality-Sensitive Hashing (LSH) to handle

  • Updated Jun 8, 2026
  • Python

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