A pocket volume analyzer for use in protein modeling.

Experiments with expanded ensembles to explore chemical space

A Python Package for Protein Dynamics Analysis

Protein and nucleic acid validation service

bedtools - the swiss army knife for genome arithmetic

Python implementation of the multistate Bennett acceptance ratio (MBAR)

Solvation Structure and Thermodynamic Mapping

macromolecular crystallography library and utilities

IQ-TREE software version 2: phylogenetics by maximum likelihood

Powerful, efficient particle trajectory analysis in scientific Python.

Identification of Protein-Ligand Binding Sites using dipolar EPR data

The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

A comprehensive library for computational molecular biology

A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.

Biomolecular simulation trajectory/data analysis.

Computational Crystallography Toolbox

Python interface of cpptraj

The Open Free Energy toolkit

Dynamic pharmacophore modeling of molecular interactions

Official git repository for Biopython (originally converted from CVS)