A Python module to calculate alignment between two sequences using EMBOSS' needle, stretcher, and water

Automatically identify non-interfering nucleotide linkers between a pegRNA and 3' motif

This is one of my first python scripts for a simple web-based tool that will generate basic information from the query DNA sequence.

Basically BLAST, but written in PostgreSQL😉

Protein to RNA reverse translation

Analysis of FASTA ,Protein,DNA sequence.

DNA or RNA complementary, reverse and reverse complementary sequences generator

A 4-bit NormalFloat (NF4) quantized version of InstaDeep's Nucleotide Transformer 2.5B Multi-Species model, optimized for significantly lower GPU memory consumption while preserving embedding quality and inference performance.

Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)

Recode a DNA sequence to match a target amino‑acid sequence with the minimal number of nucleotide changes, preserving the reading frame. Includes a CLI and Python API.

a Python program to calculate GC content from fasta file

Filter fasta sequences by length

A Python Suite for Evolutionary and Comparative Genomics

A webserver for calculating the transition/transversion mutation ratio from input nucleotide sequences.