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centaur-vova / fast-atomic-flow

High-load distributed task orchestrator: PHP 8.4 (Swoole 6.2) + Go 1.26 + NATS JetStream + Redis Lua semaphores. Custom 9-byte binary WebSocket, strict memory isolation against leaks, Observability via OpenTelemetry, Prometheus & Grafana.

Updated Jul 19, 2026
PHP

Scindices / epam--ketcher

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Web-based molecule sketcher

status-active lang-typescript lang-javascript interface-web task-visualization domain-cheminformatics task-file-io method-chemoinformatics entity-small-molecule status-published scope-focused role-viewer status-packaged-npm

Updated Jul 29, 2026
TypeScript

Scindices / molstar--molstar

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A comprehensive macromolecular library

status-active lang-typescript lang-javascript interface-web task-visualization domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule interface-api status-published scope-focused entity-complex entity-trajectory role-viewer status-packaged-npm

Updated Jul 29, 2026
TypeScript

Scindices / BradyAJohnston--MolecularNodes

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Toolbox for molecular animations in Blender, powered by Geometry Nodes.

status-active lang-python task-visualization role-plugin domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule scope-focused domain-molecular-simulation entity-trajectory interface-gui role-viewer

Updated Jul 29, 2026
Python

Scindices / nglviewer--ngl

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WebGL protein viewer

status-active lang-typescript lang-javascript interface-web task-visualization domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule interface-api status-published scope-focused entity-trajectory role-viewer status-packaged-npm

Updated Apr 14, 2025
TypeScript

Scindices / OpenChemistry--avogadroapp

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Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.

status-active lang-cpp task-visualization domain-cheminformatics task-file-io method-chemoinformatics entity-small-molecule status-published scope-focused interface-gui entity-crystal role-viewer domain-computational-chemistry

Updated Jul 27, 2026
C++

Scindices / RBVI--ChimeraX

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Source code for molecular graphics program UCSF ChimeraX

status-active lang-python lang-cpp task-visualization interface-cli domain-structural-biology task-file-io task-structure-analysis method-chemoinformatics entity-protein entity-small-molecule interface-api status-published method-physics entity-complex scope-swissknife entity-nucleic-acid interface-gui role-viewer

Updated Jul 29, 2026
Python

Scindices / uibcdf--molsysviewer

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A Mol*-powered 3D viewer for molecular systems, integrated naturally within the MolSysSuite ecosystem.

status-active lang-python interface-web task-visualization domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule interface-jupyter status-published scope-focused entity-trajectory role-viewer ecosystem-molsys

Updated Jul 27, 2026
Python

Scindices / AngelRuizMoreno--Jupyter_Dock

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Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.

lang-python status-archived task-visualization role-application domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule interface-jupyter status-published scope-focused domain-drug-discovery task-docking method-physics entity-complex

Updated Oct 30, 2023
Jupyter Notebook

Scindices / 3dmol--3Dmol.js

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WebGL accelerated JavaScript molecular graphics library

status-active lang-typescript lang-javascript interface-web task-visualization domain-structural-biology domain-cheminformatics method-chemoinformatics entity-protein entity-small-molecule interface-api status-published status-packaged-pypi scope-focused entity-complex role-viewer status-packaged-npm

Updated May 22, 2026
Jupyter Notebook

Scindices / schrodinger--pymol-open-source

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Open-source foundation of the user-sponsored PyMOL molecular visualization system.

Updated Jul 25, 2026
C

Scindices / nglviewer--nglview

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Jupyter widget to interactively view molecular structures and trajectories

status-active lang-python lang-javascript interface-web task-visualization role-plugin domain-structural-biology method-chemoinformatics entity-protein entity-small-molecule interface-jupyter status-published status-packaged-pypi status-packaged-conda scope-focused domain-molecular-simulation entity-trajectory role-viewer

Updated Feb 2, 2026
Jupyter Notebook

Scindices / OpenChemistry--avogadrolibs

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Avogadro libraries provide 3D rendering, visualization, analysis and data processing useful in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.