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entity-sequence

Here are 6 public repositories matching this topic...

Scindices / microsoft--BioGPT

lang-python status-archived domain-bioinformatics interface-cli method-deep-learning role-application interface-api status-published scope-focused domain-drug-discovery method-language-model task-sequence-analysis entity-sequence

Updated Jul 25, 2024
Python

Scindices / biopython--biopython

Official git repository for Biopython (originally converted from CVS)

status-active lang-python domain-bioinformatics task-file-io task-structure-analysis method-chemoinformatics entity-protein interface-api status-published status-packaged-pypi status-packaged-conda method-statistics role-toolkit scope-swissknife entity-nucleic-acid task-sequence-analysis entity-sequence ecosystem-biopython

Updated Jul 28, 2026
Python

Scindices / biotite-dev--biotite

A comprehensive library for computational molecular biology

status-active lang-python domain-bioinformatics domain-structural-biology task-file-io task-structure-analysis method-chemoinformatics entity-protein interface-api status-published status-packaged-pypi status-packaged-conda method-statistics role-toolkit scope-swissknife entity-nucleic-acid task-sequence-analysis entity-sequence

Updated Jul 21, 2026
Python

Scindices / scverse--scanpy

Single-cell analysis in Python. Scales to >100M cells.

status-active lang-python task-visualization domain-bioinformatics task-file-io interface-api status-published status-packaged-pypi status-packaged-conda method-machine-learning method-statistics role-toolkit scope-swissknife task-sequence-analysis entity-sequence domain-single-cell entity-multi-omics ecosystem-scverse

Updated Jul 28, 2026
Python

Scindices / google--deepvariant

DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.

status-active lang-python lang-cpp domain-bioinformatics interface-cli method-deep-learning role-application status-published scope-focused entity-nucleic-acid entity-sequence interface-gpu domain-genomics task-variant-analysis

Updated Mar 19, 2026
Python

Scindices / scikit-bio--scikit-bio

scikit-bio: a community-driven Python library for bioinformatics, providing versatile data structures, algorithms and educational resources.

status-active lang-python task-alignment domain-bioinformatics task-file-io entity-protein interface-api status-published status-packaged-pypi status-packaged-conda method-statistics role-toolkit scope-swissknife entity-nucleic-acid task-sequence-analysis entity-sequence

Updated Jul 28, 2026
Python

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